CDS

Accession Number TCMCG017C13812
gbkey CDS
Protein Id OMO95671.1
Location complement(join(17427..17511,17800..18289,18399..18609,19406..19651))
GeneID InterPro:IPR001159
Organism Corchorus olitorius
locus_tag COLO4_15730

Protein

Length 343aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01015796.1
Definition Double-stranded RNA-binding protein [Corchorus olitorius]
Locus_tag COLO4_15730

EGGNOG-MAPPER Annotation

COG_category J
Description Double-stranded RNA-binding protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003725        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004519        [VIEW IN EMBL-EBI]
GO:0004521        [VIEW IN EMBL-EBI]
GO:0004525        [VIEW IN EMBL-EBI]
GO:0004540        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016246        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016891        [VIEW IN EMBL-EBI]
GO:0016893        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0030422        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031050        [VIEW IN EMBL-EBI]
GO:0031053        [VIEW IN EMBL-EBI]
GO:0031054        [VIEW IN EMBL-EBI]
GO:0032296        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0035194        [VIEW IN EMBL-EBI]
GO:0035195        [VIEW IN EMBL-EBI]
GO:0035196        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043331        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070918        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071359        [VIEW IN EMBL-EBI]
GO:0071407        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0090502        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901699        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCATAAGAATCGTTTGAACACATATGCTCAAAGATTATCCATGCAACACCCAGTATATCAAACCGTTAATGAAGGACCTCCGCATGTTCCGAGATTCAGGTCAACTGTGGTGGTTGATGGAATAAGTTATACCTCTGTGAACACCTTTTCACATAGGAAAGCTGCTGAACAGGATGTTGCCAAACTTGCACTGGAGTCTATAGCAAAGAAGATAAAAGATGAAGGATGGCCTCTTATTCGTGAGGATACTGCATTTTGCAAGTCCATATTGCATGAATATGCAGTCAAGATGAATTTGGAAATGCCAACCTACAGTACAATTCAGCCAGAAGTATCGGTTCCATATTTTGTGACCTCTTTGGTTTTCAATGGTGTGACTTATAATGGAAACTGTGGTAGGAACAAAAAAGAGGCTGAACAATTAGCTGCACGTGCTGTCTTGCGCTCTCTTCTTGATGATCCTAGGTATGGAACATTTCTTTCAGAGATCATCAAGTCGAAAGCTAAATTGTTTAATGCTGTGAATAAAGTCAAGGATTTGTCATTTTCCCATCCTGCCTCTGTACCTAGTGGAGCAAACATGTTGATACATAAGAACACAGAGGTTGAAACTGCTGCAGTCACTGACAGTACGTCAACTGGGGCAATTCTACAGCCAAGCTCTGGAGCAAAACCTCCTCATCATGAATTGATCCATGAGACTAAAGAGGTTGAAACAGCTGTTGTCCCTGACAGAGTGCCAACTACTGCAATTCTACAGCCAATATCGGCAAAACCTCCCCACCATGAATTCAGGATTTGCAAATTAGAACAAGAAGCTGAATGTGTCAATCTTCCAATAACATTTGTGCCTTCTGCATTGGAACAGTCTTCAGATGTTGGTCAAAGTTCTTCAAGTAAGCGACGCAAGAAGAAGAAAAGGGCTAAACTGCACAATGATACTCAGTTGGCTATTGCTGCTATCCCATTGCATCAAGTTGAATCTAGTCAATGGCCCGCTGTTAATATTAAGCAAGAGGCATCATGTTGA
Protein:  
MHKNRLNTYAQRLSMQHPVYQTVNEGPPHVPRFRSTVVVDGISYTSVNTFSHRKAAEQDVAKLALESIAKKIKDEGWPLIREDTAFCKSILHEYAVKMNLEMPTYSTIQPEVSVPYFVTSLVFNGVTYNGNCGRNKKEAEQLAARAVLRSLLDDPRYGTFLSEIIKSKAKLFNAVNKVKDLSFSHPASVPSGANMLIHKNTEVETAAVTDSTSTGAILQPSSGAKPPHHELIHETKEVETAVVPDRVPTTAILQPISAKPPHHEFRICKLEQEAECVNLPITFVPSALEQSSDVGQSSSSKRRKKKKRAKLHNDTQLAIAAIPLHQVESSQWPAVNIKQEASC